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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009405 chr22:49310402 A/G RBX1 chr22:41347351-41369313:+ 0.44 6.15 1.63E-9 Box Plot
THCA rs6009405 chr22:49310402 A/G TOMM22 chr22:39077953-39081426:+ 0.56 5.93 5.73E-9 Box Plot
THCA rs6009405 chr22:49310402 A/G TUBGCP6 chr22:50656118-50683421:- 0.48 6.5 2.0E-10 Box Plot
THCA rs6009405 chr22:49310402 A/G TUG1 chr22:31366663-31375381:+ 0.56 6.03 3.33E-9 Box Plot
THCA rs6009405 chr22:49310402 A/G UBE2L3 chr22:21903736-21978323:+ 0.54 5.9 6.97E-9 Box Plot
THCA rs600968 chr11:77569784 T/C INTS4L1 chr7:64601603-64694600:+ 0.43 7.73 6.2E-14 Box Plot
THCA rs600974 chr11:49251508 A/C FOLH1B chr11:89372395-89431886:+ 0.46 6.73 4.9E-11 Box Plot
THCA rs60101680 chr22:24049573 T/C IGLL3 chr22:25713888-25716191:+ 0.7 10.06 9.9E-22 Box Plot
THCA rs6010472 chr22:49157038 A/T ACO2 chr22:41865129-41924993:+ 0.55 7.52 2.82E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T ADSL chr22:40742504-40786467:+ 0.61 7.74 5.91E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T ALG12 chr22:50293877-50312106:- 0.5 6.73 4.83E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T ANKRD54 chr22:38226862-38245334:- 0.57 7.65 1.11E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T AP1B1 chr22:29723669-29819168:- 0.7 7.97 1.21E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T APOBEC3F chr22:39436609-39449915:+ 0.51 6.74 4.57E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T ARFGAP3 chr22:43192508-43254112:- 0.64 7.65 1.1E-13 Box Plot